G74A_M3.fastq FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	G74A_M3.fastq
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	18574477
Sequences flagged as poor quality	0
Sequence length	40
%GC	44

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	790	0.0	10.771642	1
ATGCCGA	930	0.0	8.773929	25
ATCGGAA	970	0.0	8.592182	2
CGGTTCA	1015	0.0	7.8700304	12
AGCGGTT	1035	0.0	7.717496	10
AATGCCG	1170	0.0	7.118888	24
GAGCGGT	1250	0.0	6.933924	9
AGACCGG	1360	0.0	6.7525597	31
GAGACCG	1425	0.0	6.6835237	30
GCGGTTC	1245	0.0	6.552255	11
CGAGACC	1290	0.0	6.4600573	29
CCGAGAC	1435	0.0	6.2813635	28
TCGGAAG	1655	0.0	5.7512403	3
CGATAAC	370	0.008564221	5.519738	1
CCGGAAC	1565	0.0	5.4334574	34
AAGAGCG	1665	0.0	5.4099374	7
TGCCGAG	1515	0.0	5.38734	26
GACCGGA	1525	0.0	5.3528495	32
AGAGCGG	2120	0.0	5.050442	8