FastQCFastQC Report
Thu 8 Jun 2017
G76_C2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG76_C2.fastq
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences42415932
Sequences flagged as poor quality0
Sequence length40
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA12400.08.643831
ATGCCGA14200.07.062862425
ATCGGAA16900.06.7403352
CGGTTCA16650.06.63619712
AATGCCG17800.05.825408524
GCGGTTC19700.05.781369711
AGCGGTT21800.05.692551610
GAGCGGT19900.05.3819539
CGAGACC21300.05.028054729
Produced by FastQC (version 0.11.2)