FastQCFastQC Report
Thu 8 Jun 2017
G76_M2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG76_M2.fastq
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences13385512
Sequences flagged as poor quality0
Sequence length40
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATGCCG5055.042117E-55.72230924
CGGTTCA4851.7331212E-45.60779412
ATGCCGA4851.7331212E-45.60779425
TCGGAAC4500.00233142335.288519411
GATCGGA5154.0531185E-45.28325751
Produced by FastQC (version 0.11.2)