FastQCFastQC Report
Thu 8 Jun 2017
G76_M3.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG76_M3.fastq
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences14055260
Sequences flagged as poor quality0
Sequence length40
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA5000.017.3478951
ATGCCGA5550.014.395267525
ATCGGAA7550.012.1607982
CGGTTCA7350.012.02622412
AGCGGTT8250.011.7453710
GCGGTTC8050.011.61403711
AATGCCG7200.011.56849624
GAGCGGT8200.010.3662959
AGACCGT7700.09.71400731
CGAGACC8500.09.39973129
GACCGTG8750.08.9371132
TGCCGAG9800.08.8465626
AAGAGCG10250.08.4588977
GAGACCG10300.08.41723330
CCGTGGA10450.08.13486734
TCGGAAG11600.07.91539673
ACCGTGG10300.07.757417733
AGAGCGG12050.07.4774968
CCGAGAC10800.07.397936328
GCCGAGA11300.07.371443727
Produced by FastQC (version 0.11.2)