130524Wax_D13-2455_NA_sequence.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	130524Wax_D13-2455_NA_sequence.fastq
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	21418624
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGCGTTATATCTCGTA	60190	0.2810171185599971	Illumina Paired End PCR Primer 2 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGTTA	7180	41.572487	35
ACCGCGT	7350	40.462917	33
GCGTTAT	7430	40.20357	36
TCTCGTA	7410	40.198875	44
CGTTATA	7485	39.99426	37
TATCTCG	7700	38.99635	42
ATGCCGA	8635	38.444054	25
GACCGCG	7875	38.10174	32
CCGCGTT	7875	38.07212	34
ATCTCGT	7905	37.62514	43
AGACCGC	8015	37.35448	31
AATGCCG	9245	36.23873	24
CGAGACC	8350	36.172394	29
GAGACCG	8375	36.11737	30
CCGAGAC	8385	35.998535	28
GATCGGA	9470	35.9645	1
TGCCGAG	9310	35.73007	26
ATCGGAA	9665	35.454266	2
CGGTTCA	9730	34.72045	12
GAGCGGT	9770	34.60146	9