130524Wax_D13-2457_NA_sequence.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	130524Wax_D13-2457_NA_sequence.fastq
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	23497206
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTACCGCATCTCGTA	80030	0.34059368590461353	Illumina Paired End PCR Primer 2 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTACCG	8935	41.950203	35
GACCGTA	9180	40.976738	32
ACCGTAC	9225	40.919403	33
TCTCGTA	9285	40.44382	44
CCGTACC	9370	40.214294	34
GTACCGC	9420	39.696938	36
TACCGCA	9490	39.494656	37
ACCGCAT	9770	39.263306	38
AGACCGT	9855	38.17068	31
CGCATCT	10070	37.9839	40
ATGCCGA	11210	37.914215	25
ATCTCGT	10040	37.68652	43
CCGCATC	10180	37.63804	39
GATCGGA	11590	37.30234	1
CCGAGAC	10615	36.974964	28
CGAGACC	10620	36.954098	29
CGGTTCA	11660	36.839966	12
AATGCCG	11595	36.824814	24
GAGACCG	10665	36.7577	30
ATCGGAA	11965	36.37797	2