FastQCFastQC Report
Wed 24 Apr 2019
SRR6833759_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6833759_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9018095
Sequences flagged as poor quality0
Sequence length32-36
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACT8463059.38452078848138TruSeq Adapter, Index 8 (100% over 36bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG401900.44565953230698946No Hit
TATCGGAAGAGCACACGTCTGAACTCCAGTCACACT192450.21340427218830585TruSeq Adapter, Index 8 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)