FastQCFastQC Report
Wed 24 Apr 2019
SRR6833764_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6833764_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13432864
Sequences flagged as poor quality0
Sequence length32-36
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGT226148616.835471571810746TruSeq Adapter, Index 8 (97% over 36bp)
TATCGGAAGAGCACACGTCTGAACTCCAGTCACAGT491680.3660276765997184TruSeq Adapter, Index 13 (97% over 36bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG402160.29938514973426367No Hit
CATCGGAAGAGCACACGTCTGAACTCCAGTCACAGT230840.1718471950583286TruSeq Adapter, Index 13 (97% over 36bp)
AATCGGAAGAGCACACGTCTGAACTCCAGTCACAGT168710.12559495875190876TruSeq Adapter, Index 13 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)