FastQCFastQC Report
Wed 24 Apr 2019
SRR6833764_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6833764_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13432864
Sequences flagged as poor quality0
Sequence length32-36
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2038291.51739048351863No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGTTTTT1482691.1037780178523358No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGGTTTT1470751.0948893698320776No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTT745330.5548556138140012No Hit
GGGGGGGGGGGGGGGGGGGGGGGGAAAAAAGTTTTT574880.4279653244460749No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT351210.261455784857198No Hit
GGGGGGGGGGGGGGGGGGGGGGGGAAAAAAGGTTTT280400.20874178432834575No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAGGGTTTT242200.18030406620658113No Hit
GGGGGGGGGGGGGGGGGGGTGGGGGAAAAAGTTTTT215000.16005521979527224No Hit
GGGGGGGAGGGGGGGGGGGGGGGGAAAAAAGTTTTT185030.13774426659869407No Hit
GGGGGGGGGGGGGGGGGGGTGGGGGAAAAAGGTTTT156870.11678075501992725No Hit
GGGGGGGGGGGGGGGGGGGTGGGGAAAAAAGTTTTT142210.10586722235853799No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)