FastQCFastQC Report
Tue 23 Apr 2019
G168_G169_M17_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG168_G169_M17_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26318260
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGC1756440.6673845459388272TruSeq Adapter, Index 11 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT283480.10771228797040533No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)