G115-M1_GATCAG_AC6GPWANXX_L007_001.R1.fastq FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	G115-M1_GATCAG_AC6GPWANXX_L007_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	48165028
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	1855	0.0	11.267408	42
TCGTATG	1975	0.0	10.137056	43
CGATCAG	2315	0.0	9.1231	33
CGTATGC	2330	0.0	9.064886	44
TCTCGTA	2010	0.0	8.647125	41
ACGATCA	2580	0.0	8.356433	32
GTCACGA	2790	0.0	8.279458	29
TCACGAT	3030	0.0	7.1880217	30
CACGATC	2900	0.0	7.130938	31
GATCGGA	3065	0.0	6.757922	1
CGTCTGA	3465	0.0	6.4121456	16
GATCTCG	3155	0.0	6.136502	39
ACACGTC	3695	0.0	6.132179	13
ATCGGAA	3705	0.0	5.93741	2
ACGTCTG	4215	0.0	5.584335	15
AGTCACG	4640	0.0	5.3103447	28
ATCTCGT	3500	0.0	5.28023	40