FastQCFastQC Report
Thu 6 Jul 2017
G155-M14-Index6_GCCAAT-_ACB6A7ANXX_L008_001.R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG155-M14-Index6_GCCAAT-_ACB6A7ANXX_L008_001.R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21671906
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA6851.2732926E-118.029491
TCGTATG7304.620233E-107.232322743
CGTATGC8159.640644E-117.01777144
CGCCAAT7902.557499E-96.68389633
TCTCGTA7403.333662E-86.540341441
CTCGTAT8152.2200948E-75.93841542
ATCGGAA9705.4114935E-95.89710862
CGTCTGA11401.1314114E-95.596450316
ACGCCAA10402.6155249E-85.500454432
GTCACGC11752.406523E-95.429609329
Produced by FastQC (version 0.11.2)