FastQCFastQC Report
Thu 6 Jul 2017
G155-M14-Index6_GCCAAT-_ACB6A7ANXX_L008_001.R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG155-M14-Index6_GCCAAT-_ACB6A7ANXX_L008_001.R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21671906
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG4501.4551915E-1110.267714512
GCGTCGT4551.891749E-109.67102411
AGCGTCG5051.3624231E-98.71349810
GATCGGA6908.138159E-97.0204131
ATCGGAA9001.4804664E-65.3823172
TCGTGTA10552.0474909E-75.21356114
Produced by FastQC (version 0.11.2)