SRR6575152_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575152_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	776200
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1208	0.1556299922700335	No Hit
ACTTAAGACAGACTATGATAATTATATTATGATTCATCTCATTAACAAAA	1131	0.14570986859056945	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	949	0.12226230353001805	No Hit
CTATTATGCTGGCCACTGACAAAAGAGAAAAGATAGAAGAACATGGCAGC	800	0.1030662200463798	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1325	55.84845	1
GGTATCA	405	52.370274	1
ATCAACG	1755	41.777462	3
TCAACGC	1765	41.540764	4
CAACGCA	1800	40.994137	5
AACGCAG	1890	39.042038	6
TATCAAC	2060	35.36381	2
GTACATG	2875	34.26382	1
TACATGG	2955	33.400764	2
ACATGGG	3035	32.984924	3
CGCAGAG	2275	32.43283	8
ACGCAGA	2345	31.264275	7
ACCTAAG	430	29.595295	1
GCAGAGT	2625	28.287487	9
CTAAGAC	490	27.816116	3
ACTTAAG	510	27.72544	1
TTAAGAC	510	27.646852	3
AGAGTAC	2255	27.510214	10-11
GTCTTAG	395	27.444675	1
CTTAAGT	345	27.246172	3