SRR6575178_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575178_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	856521
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4236	0.4945588024111493	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2830	0.3304063764928122	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2645	0.3088073730825047	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1890	0.22066008889449293	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1493	0.1743097950896709	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1288	0.15037576428365446	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1270	0.14827423962751643	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1090	0.12725899306613614	No Hit
GAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATTTAT	968	0.11301532595231173	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	961	0.1121980663638136	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	914	0.10671075198389764	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	897	0.10472597869754507	No Hit
GTACATGGGGGAGTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAG	878	0.1025077026716216	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGCTGTGTTTGGG	876	0.1022741999320507	No Hit
ATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGT	868	0.10134018897376712	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	860	0.10040617801548356	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	395	55.937668	1
GTATCAA	1910	54.887707	1
ATCAACG	2195	45.605995	3
CTTAGGT	810	45.257065	3
TCAACGC	2255	44.39253	4
AGGTATA	840	43.640743	6
TTAGGTA	830	43.600296	4
TAGGTAT	855	42.87512	5
CAACGCA	2350	42.797928	5
AACGCAG	2390	42.278286	6
GTCTTAG	950	41.568016	1
TATCAAC	2505	39.973804	2
GGTATAG	945	38.79177	7
TATAGTA	1125	37.18042	9
GTATAGT	1125	37.18042	8
TCTTAGG	1050	36.26597	2
ACGCAGA	2875	35.146122	7
ACCAGAT	1800	34.726097	94
ACCTAAG	1505	34.672894	1
GTACATG	3960	33.833992	1