SRR6575211_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575211_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	786284
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3654	0.46471758295984655	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2321	0.29518596334148983	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1957	0.24889225775928292	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1273	0.16190078902788305	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1246	0.1584669152621699	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1223	0.15554176353582166	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1038	0.13201336921519452	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	928	0.11802351313265945	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	855	0.10873933591424982	No Hit
GTATGGATAGGAAGGGATGATGGTGGAGTCCTGGTGAGAAGTCTCCACTC	810	0.10301621297139456	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	385	0.0	59.85682	1
CGTATAC	25	0.005236549	56.396946	3
GTATCAA	1630	0.0	51.93536	1
ATCAACG	1770	0.0	46.997456	3
TCAACGC	1780	0.0	46.733425	4
CAACGCA	1870	0.0	44.986874	5
AACGCAG	1925	0.0	43.945675	6
TATCAAC	1970	0.0	42.01697	2
CTTAGGT	725	0.0	39.54269	3
TTAGGTA	750	0.0	38.224598	4
TAGGTAT	770	0.0	37.84211	5
GTCTTAG	880	0.0	35.8072	1
AGGTATA	830	0.0	34.5403	6
GGTATAG	830	0.0	34.5403	7
ACGCAGA	2445	0.0	34.407135	7
CGCAGAG	2490	0.0	33.78532	8
TCTTAGG	1025	0.0	32.577126	2
GTACATG	3145	0.0	31.552956	1
GGTAATC	300	0.0	31.331636	8
GTAATCA	350	0.0	30.884043	9