SRR6575212_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575212_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	701992
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3471	0.4944500792031818	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2251	0.32065892488803294	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1808	0.2575527926244174	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1180	0.16809308368186532	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1030	0.14672531880705195	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	908	0.12934620337553704	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	895	0.1274943304197199	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	804	0.11453121972899977	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	767	0.10926050439321246	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	707	0.10071339844328711	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	365	52.8766	1
GTATCAA	1475	52.01973	1
TCAACGC	1600	47.286293	4
ATCAACG	1600	46.99259	3
CAACGCA	1675	44.888443	5
AACGCAG	1730	43.18972	6
TATCAAC	1880	40.002247	2
TTAGGTA	700	36.251427	4
TAGGTAT	690	36.09576	5
GTCTTAG	765	35.074055	1
CTTAGGT	720	33.93909	3
ACGCAGA	2215	33.73283	7
CGCAGAG	2255	33.36425	8
AGGTATA	770	32.34555	6
TATAGTA	830	31.726183	9
GTACATG	2790	31.382046	1
GTATAGT	845	31.162996	8
GGTATAG	805	30.939222	7
GCAGAGT	2445	30.386883	9
TACATGG	2865	30.350742	2