SRR6575257_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575257_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	908586
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3813	0.41966308087511806	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2085	0.2294774517767168	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1896	0.20867589859407915	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1618	0.17807890502385024	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1453	0.15991881891202372	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1198	0.13185323128465548	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1101	0.12117730187346051	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1067	0.11743522352314477	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1012	0.11138186148586926	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	961	0.1057687439603956	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	939	0.10334739914548541	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	921	0.10136629884237706	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	435	54.0396	1
GTATCAA	1710	51.413464	1
TCAACGC	2105	41.528744	4
ATCAACG	2115	40.88796	3
CAACGCA	2200	39.308193	5
AACGCAG	2295	37.88584	6
GTACATG	4470	37.23292	1
TACATGG	4465	37.064026	2
ACCTAAG	1240	35.639988	1
TAAGACA	1505	35.600517	4
ACATGGG	4680	35.14877	3
CTAAGAC	1325	35.11618	3
TATCAAC	2530	34.935642	2
TAGGTAT	630	34.316677	5
CTTAGGT	640	33.780476	3
GTCTTAG	765	33.18667	1
AGGTATA	645	32.789948	6
CCTAAGA	1435	32.76268	2
TTAGGTA	645	32.061283	4
TTAAGAC	250	31.95927	3