SRR6575258_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575258_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	835639
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3884	0.4647940079388348	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2095	0.25070634568276495	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1795	0.21480567565659334	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1454	0.17399858072684496	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1253	0.14994513180931	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1147	0.13726022840006272	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1004	0.12014757568758758	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	998	0.11942956228706415	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	908	0.10865936127921268	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	893	0.10686432777790408	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	854	0.1021972406745018	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	846	0.10123988947380387	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1690	57.310925	1
TCAACGC	2095	45.0826	4
ATCAACG	2120	44.77261	3
CAACGCA	2160	43.72333	5
GGTATCA	350	42.987167	1
AACGCAG	2230	42.561554	6
TATCAAC	2495	37.877598	2
GTACATG	4175	34.910984	1
TACATGG	4225	34.720406	2
ACGCAGA	2785	34.079807	7
GTCTTAG	635	34.059715	1
TTAGGTA	600	32.892357	4
AGGTATA	600	32.89039	6
CGCAGAG	2880	32.7925	8
ACCTAAG	1105	32.763126	1
ACATGGG	4450	32.417187	3
TAGGTAT	600	32.107285	5
CTAAGAC	1215	32.099537	3
CTTAGGT	615	31.326052	3
AAGGGTA	325	30.360357	5