SRR6575293_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575293_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	36359
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	80	0.22002805357683106	No Hit
GTACATGGGAGGCAGAGCTGTTGTGGTCAGCTGTGGAAAGGAAGCCTCGT	56	0.15401963750378173	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	51	0.1402678841552298	No Hit
CTTGTAGACAATGTCGCCCAATGTCATGGTATTGGTGATTGTGTCTCCAT	49	0.13476718281580902	No Hit
GTAAAAGAATATGAAATATAGCCTTGTCTAAATTCTCTTGCTGACTCTCT	45	0.12376578013696747	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45	0.12376578013696747	No Hit
GTACATGGGGAGGCAGAGCTGTTGTGGTCAGCTGTGGAAAGGAAGCCTCG	41	0.11276437745812591	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	39	0.10726367611870515	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37	0.10176297477928437	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGGAG	50	5.844413E-9	65.79614	5
TGGGGAG	55	1.2410965E-8	59.81468	6
GTCTTAG	25	0.005140199	56.552273	1
TTATAGT	25	0.0051966645	56.396698	3
TGGATAC	25	0.0051966645	56.396698	5
ACATGGG	265	0.0	53.204433	3
CATGGGA	80	7.4578566E-11	52.871906	4
GTATCAA	100	0.0	51.839584	1
GTACATG	285	0.0	51.260834	1
TACATGG	285	0.0	51.260834	2
GGTATCA	50	2.9050456E-5	47.126896	1
CATGGGG	195	0.0	43.382076	4
TAAGCCA	45	0.0010013258	41.775333	4
AGAATAT	45	0.0010013258	41.775333	6
ATGGGGA	105	1.0768417E-9	40.283356	5
AGCTGTT	25	0.0016920493	37.597797	16-17
CAACGCA	150	2.5465852E-11	34.46465	5
ATCAACG	150	2.5465852E-11	34.46465	3
AACGCAG	150	2.5465852E-11	34.46465	6
TCAACGC	150	2.5465852E-11	34.46465	4