SRR6575337_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575337_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	218139
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	518	0.23746326883317517	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	357	0.16365711770935046	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	307	0.14073595276406328	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	307	0.14073595276406328	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	255	0.11689794122096461	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	254	0.11643951792205887	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	234	0.107271051943944	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	230	0.10543735874832103	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	225	0.1031452422537923	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	635	0.0	48.914818	1
TTAGGTA	85	7.8835E-9	44.232708	4
TAGGTAT	75	1.4742909E-7	43.8641	5
AGGTATA	80	2.4474866E-7	41.122593	6
CTTAGGT	85	3.9378574E-7	38.70362	3
GTGATCG	65	1.4102242E-4	36.15173	8
GTCTTAG	120	4.120011E-9	35.296486	1
CTCTTAG	55	0.0026947292	34.2269	2
TTAACCT	55	0.0027129848	34.179817	4
ATCAACG	915	0.0	33.899654	3
TCTTAGG	140	4.984031E-10	33.615704	2
CAACGCA	930	0.0	33.352886	5
TCAACGC	930	0.0	33.352886	4
GTACTTG	115	1.11713234E-7	32.73877	1
GGTATCA	310	0.0	31.8807	1
AACGCAG	965	0.0	31.656176	6
GTATAAG	60	0.0041269436	31.374655	1
TCGGATC	30	0.004159369	31.331501	22-23
GGTATAG	105	2.0561802E-6	31.331501	7
ATGGGAG	170	1.2187229E-10	30.409986	5