SRR6575370_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575370_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	270088
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	693	0.25658303960190754	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	413	0.15291312461123782	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	404	0.14958087734368058	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	403	0.14921062764728532	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	356	0.1318088919167086	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	330	0.12218239981043215	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	312	0.11551790527531768	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	312	0.11551790527531768	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	291	0.10774266165101745	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTCCTA	40	5.643844E-4	47.042347	1
CGCTAAA	45	0.0010127041	41.77671	5
GTATCAA	760	0.0	37.75767	1
TAATACC	100	3.311652E-8	37.599037	4
CCGCTAA	55	0.0027136866	34.180943	4
TAGGACA	110	7.660856E-8	34.180943	4
CCCGCTA	55	0.0027136866	34.180943	3
TACTATC	70	2.180924E-4	33.570568	7
GGTACCT	240	0.0	33.290813	8
GGGTACC	240	0.0	33.290813	7
GTACTAG	85	1.739082E-5	33.206364	1
TAGTTCC	85	1.7501441E-5	33.17562	94
ATCAACG	850	0.0	32.622692	3
TCAACGC	860	0.0	32.24336	4
GTACATG	1385	0.0	31.927656	1
ACATGGG	1355	0.0	31.563766	3
ATCGTCA	45	2.5918514E-5	31.332533	10-11
GAGTTGC	105	2.058052E-6	31.332531	94
CAACGCA	870	0.0	31.33253	5
TGTAAAC	60	0.00415592	31.33253	3