SRR6575374_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575374_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	618092
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2834	0.4585077949560906	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1651	0.2671123392634106	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1525	0.24672702445590625	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	998	0.16146463633245536	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	863	0.13962322761012924	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	816	0.13201918161050458	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	805	0.1302395112701669	No Hit
ACTTAAGACAGACTATGATAATTATATTATGATTCATCTCATTAACAAAA	789	0.12765089986603936	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	705	0.11406068999436976	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	641	0.10370624437785962	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1570	58.795197	1
ATCAACG	1840	48.788967	3
GGTATCA	330	48.523308	1
CAACGCA	1860	48.01166	5
TCAACGC	1920	46.511295	4
TATCAAC	1965	45.446156	2
AACGCAG	1985	44.98826	6
ACGCAGA	2190	40.559128	7
AAGGGTA	190	39.5797	5
CGCAGAG	2365	37.557926	8
GCAGAGT	2460	36.107517	9
GTACATG	2555	33.179283	1
TACATGG	2630	31.989199	2
ACATGGG	2665	31.21635	3
AGGGTAA	230	30.652754	6
AGAGTAC	2240	30.002607	10-11
GGTAATC	225	29.242634	8
ACCTAAG	905	29.142368	1
CATGGGG	1655	28.967316	4
AGGTATA	555	28.793339	6