SRR6575377_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575377_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	684365
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2835	0.4142526283489074	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1718	0.2510356315708723	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1541	0.22517223995967062	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1055	0.15415750367128653	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1024	0.14962775711791224	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	943	0.1377919677365149	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	730	0.10666822528913665	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	725	0.10593762100633433	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	370	55.998463	1
GTATCAA	1390	55.897747	1
TCAACGC	1680	44.755505	4
ATCAACG	1710	43.695503	3
CAACGCA	1740	43.212208	5
AACGCAG	1865	40.567924	6
TATCAAC	1875	40.103863	2
ACGCAGA	2265	32.98866	7
AGGTATA	545	32.765957	6
TAGGTAT	565	32.437836	5
GTCTTAG	725	31.826086	1
CGCAGAG	2375	31.481468	8
TTAGGTA	580	30.7887	4
GCAGAGT	2580	29.526825	9
CTTAGGT	605	29.51644	3
GGTATAG	610	29.2745	7
AAGGGTA	275	29.050388	5
ACCAGAT	1265	28.997282	94
AGGGTAA	260	28.91894	6
CTAAGAC	1190	28.827808	3