SRR6575415_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575415_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	96419
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	224	0.2323193561434987	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	205	0.21261369647061265	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	146	0.15142243748638753	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	130	0.13482819776185193	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	117	0.12134537798566673	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	113	0.11719681805453283	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	106	0.10993683817504848	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	99	0.10267685829556417	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	98	0.10163971831278068	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	97	0.1006025783299972	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAAAGT	30	1.3658713E-4	62.656982	3
CCCCTTG	40	7.985771E-6	58.740925	7
ACGTAGG	25	0.005224737	56.391285	94
TCTTAAG	35	2.926234E-4	53.70599	2
GTCTTAA	40	5.554441E-4	47.16398	1
TTCCGCT	20	5.66922E-4	46.99274	44-45
CATGGGG	255	0.0	46.071312	4
CCCCGCC	65	2.7612714E-6	43.377914	2
TCCCCGC	55	5.1401556E-5	42.876343	1
AAGTATA	45	0.0010101022	41.771324	6
TAGAGCA	45	0.0010101022	41.771324	4
TACAACA	45	0.0010101022	41.771324	4
GTATCAA	390	0.0	39.90798	1
CCTAGAG	60	8.772034E-5	39.160614	2
CCCTTGC	60	8.772034E-5	39.160614	8
CGCCCCT	60	8.772034E-5	39.160614	5
ATTATCC	50	0.0016955915	37.594193	3
TACAGGT	50	0.0016955915	37.594193	4
CCGCCCC	75	7.380804E-6	37.594193	4
TAAGTAT	70	2.1722168E-4	33.566242	5