SRR6575429_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575429_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	937430
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3841	0.40973726038210856	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2439	0.26017942673052924	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2426	0.25879265651835337	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1647	0.17569311841950866	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1427	0.15222469944422518	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1363	0.1453975230150518	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1163	0.12406259667388497	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	1065	0.11360848276671325	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	986	0.10518118686195237	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	984	0.1049678375985407	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	505	0.0	55.852264	1
GTATCAA	1890	0.0	54.222008	1
ATCAACG	2285	0.0	43.605164	3
TCAACGC	2300	0.0	43.320778	4
CAACGCA	2410	0.0	41.148464	5
TATCAAC	2420	0.0	40.792923	2
AACGCAG	2510	0.0	39.509087	6
TTACGCA	55	0.0027170484	34.181065	4
AGGTATA	815	0.0	32.870438	6
ACGCAGA	3065	0.0	32.35491	7
CTTAGGT	835	0.0	32.083122	3
ACCTAAG	1390	0.0	31.790255	1
TAGGTAT	845	0.0	31.70344	5
CGCAGAG	3165	0.0	31.332642	8
GTCTTAG	955	0.0	31.011166	1
GGTATAG	910	0.0	30.471851	7
GTACATG	3755	0.0	30.170883	1
ACCAGAT	1545	0.0	30.115839	94
TTAGGTA	910	0.0	29.95538	4
TACATGG	3805	0.0	29.77442	2