SRR6575437_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575437_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	71648
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	246	0.3433452434122376	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	130	0.18144260830728004	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	105	0.1465497990174185	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	100	0.13957123715944617	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	85	0.11863555158552926	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	83	0.11584412684234034	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	80	0.11165698972755694	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	80	0.11165698972755694	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	74	0.10328271549799017	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACTAC	15	6.8755826E-4	94.0	9
CCCTAAT	20	0.0021546823	70.49999	1
ACCTGTA	20	0.0021546823	70.49999	2
GGAGGGT	25	0.0052160677	56.399998	8
ATGGGAG	255	0.0	53.45098	5
ATGGGGC	55	8.694551E-7	51.272728	5
ATGGGAC	115	1.8189894E-12	44.95652	5
TGGGAGA	150	0.0	43.86667	6
GTATCAA	550	0.0	43.581818	1
CATGGGC	100	6.85759E-10	42.3	4
GTACATG	1025	0.0	41.72683	1
TACATGG	1025	0.0	41.72683	2
ACATGGG	1045	0.0	40.928226	3
CATGGGA	690	0.0	40.188408	4
TGGGATG	80	1.1435704E-5	35.249996	6
AACGCAG	685	0.0	34.992702	6
TGGGACT	95	9.287269E-7	34.63158	6
GGGAGAC	55	0.0027001062	34.181816	7
TGGGGCT	55	0.0027001062	34.181816	6
CCTCTAG	55	0.0027001062	34.181816	1