SRR6575507_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575507_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	519342
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC	919	0.17695468496674638	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT	778	0.14980494548871456	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	763	0.14691667533147712	No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC	659	0.12689133557463098	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGG	565	0.1087915092559431	No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT	556	0.10705854716160064	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	538	0.10359262297291573	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	531	0.10224476356620493	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1295	0.0	52.99303	1
CAACGCA	1650	0.0	41.30265	5
ATCAACG	1655	0.0	40.893883	3
GTACTAG	255	0.0	40.55255	1
AACGCAG	1870	0.0	38.202858	6
TCAACGC	1860	0.0	36.38676	4
TATCAAC	1950	0.0	35.6749	2
ACGCAGA	2040	0.0	33.176167	7
CGCAGAG	2040	0.0	33.176167	8
AGGTATA	160	6.002665E-11	32.312202	6
GCAGAGT	2235	0.0	30.2816	9
GGTATCA	530	0.0	30.153566	1
TACCTAC	80	4.7748815E-4	29.377558	1
TTATCCT	450	0.0	29.244175	4
GTATGAC	65	0.006151381	28.92281	3
CTATTAT	375	0.0	28.829178	1
CTATTGA	310	0.0	28.806187	9
CTAGGCA	395	0.0	28.556698	4
ATAGGTA	220	3.6379788E-12	27.772472	94
AGAGTAC	2060	0.0	27.606543	10-11