SRR6575511_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575511_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1059642
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2508	0.23668371015871398	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1537	0.14504898824319912	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1535	0.14486024525264193	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1451	0.13693303964924003	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1316	0.12419288778662983	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1192	0.11249082237208416	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1113	0.10503547424507523	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1092	0.10305367284422476	No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG	1085	0.10239307237727459	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1085	0.10239307237727459	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1060	0.10003378499530972	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1755	58.38449	1
GGTATCA	435	51.86449	1
TCAACGC	2330	42.76191	4
ATCAACG	2345	42.488377	3
CAACGCA	2410	41.147415	5
AACGCAG	2465	40.419975	6
TATCAAC	2890	35.129665	2
GTACATG	4485	33.221172	1
TACATGG	4555	32.71064	2
ACATGGG	4720	31.464603	3
ACGCAGA	3170	31.43068	7
CGCAGAG	3430	29.048178	8
TAGGTAT	530	28.376005	5
CATGGGG	3110	28.259104	4
AGGTATA	545	26.732668	6
TTAGGTA	550	26.489647	4
GCAGAGT	3745	26.47938	9
TAAGACA	1300	26.39105	4
AGAGTAC	3175	26.27434	10-11
CTTAGGT	545	25.870325	3