SRR6575591_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575591_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1464985
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	7743	0.5285378348583775	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	5471	0.37345092270569324	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3220	0.2197974723290682	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	2302	0.15713471468991153	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	2223	0.15174216800854617	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1989	0.13576930821817287	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1978	0.1350184472878562	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1599	0.10914787523421741	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1571	0.10723659286613857	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	730	54.741833	1
GTATCAA	2505	51.424034	1
ATCAACG	2820	43.987175	3
TCAACGC	2865	43.296272	4
CAACGCA	3045	40.73689	5
TATCAAC	3110	39.756104	2
AACGCAG	3160	39.254375	6
AGGTATA	1250	37.964928	6
TTAGGTA	1330	37.094444	4
TAGGTAT	1295	37.00851	5
CTTAGGT	1305	36.004826	3
ACCTAAG	2295	35.84913	1
GTCTTAG	1590	34.594894	1
CTAAGAC	2700	32.716385	3
TAAGACA	3095	31.121778	4
TATAGTA	1635	31.03682	9
ACGCAGA	4005	30.97224	7
CCTAAGA	2730	30.8247	2
GGTATAG	1545	30.715961	7
TACATGG	5315	30.427317	2