SRR6575591_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575591_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1464985
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	8261	0.5638965586678363	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	5422	0.37010617856155525	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3267	0.22300569630405773	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	2027	0.1383631914319942	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1972	0.13460888678041072	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1930	0.13174196322829243	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1920	0.13105936238255	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1640	0.11194653870176147	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	750	50.860798	1
GTATCAA	2260	50.42737	1
TCAACGC	2645	41.219402	4
ATCAACG	2655	41.064148	3
CAACGCA	2855	38.6813	5
AGGTATA	1345	38.08279	6
TATCAAC	2940	37.56297	2
TTAGGTA	1365	37.52608	4
AACGCAG	2940	37.401848	6
TAGGTAT	1360	37.318504	5
CTTAGGT	1395	37.055943	3
ACCTAAG	2335	36.303207	1
GTCTTAG	1615	36.158344	1
CTAAGAC	2610	35.110214	3
TAAGACA	2930	32.879528	4
GGTATAG	1585	32.316307	7
CCTAAGA	2695	32.259106	2
TCTTAGG	1890	30.831823	2
GTACATG	5495	30.424257	1
TACATGG	5425	30.40512	2