SRR6575604_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575604_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	401070
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	963	0.24010771187074575	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	591	0.14735582317301218	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	540	0.13463983843219388	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	534	0.13314384022739173	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	510	0.12715984740818312	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	489	0.12192385369137557	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	449	0.11195053232602788	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	433	0.1079612037798888	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	408	0.10172787792654649	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	405	0.10097987882414543	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1215	0.0	42.993603	1
ATCAACG	1555	0.0	32.934326	3
CAACGCA	1545	0.0	32.843388	5
TCAACGC	1545	0.0	32.843388	4
AACGCAG	1545	0.0	32.53928	6
ACATGGG	2615	0.0	31.442642	3
GCACTAC	60	0.0041645905	31.322859	3
TACATGG	2745	0.0	31.151695	2
GTACATG	2750	0.0	31.145536	1
ATAAGAC	95	3.754809E-5	29.67429	3
CATTGCG	65	0.0061332863	28.938663	9
TATCAAC	1890	0.0	27.593948	2
CATGGGT	545	0.0	27.587107	4
ACGCAGA	1790	0.0	27.564054	7
CATGGGG	1235	0.0	27.011211	4
TAGGACA	105	7.4266136E-5	26.848167	4
ATATAGG	70	0.008843694	26.848166	2
CGCAGAG	1835	0.0	26.395689	8
GTGTACA	190	1.3093086E-8	24.768717	1
TTAGGCT	95	0.0013056466	24.728575	4