SRR6575745_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575745_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	792288
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3012	0.38016478856173513	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1979	0.24978290722565533	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1724	0.2175976412617634	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1051	0.13265378246294277	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1038	0.13101296498243062	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1035	0.13063431479462015	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	998	0.12596429581162405	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	922	0.11637182438709157	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	898	0.11334262288460761	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	856	0.10804152025526072	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	836	0.10551718566985742	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	825	0.10412880164788563	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3050	38.73133	1
ATCAACG	3710	31.412895	3
TCAACGC	3820	30.75437	4
CAACGCA	3790	30.749826	5
AACGCAG	3915	29.76803	6
TATCAAC	3995	29.407185	2
CTTAGGT	615	29.036127	3
ATGGGGG	915	28.760548	5
TAGGTAT	595	28.432543	5
AGGTATA	585	28.115278	6
TTAGGTA	615	27.50791	4
CATGGGG	2245	27.421118	4
ACCTAAG	1165	27.066832	1
GTCTTAG	740	26.711983	1
AAGGGTA	300	26.629187	5
TCTTAGG	750	26.3159	2
GTACATG	6015	25.977118	1
ACGCAGA	4530	25.726675	7
TAAGACA	1265	25.632372	4
CGCAGAG	4555	25.60325	8