SRR6575777_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575777_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1092644
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2338	0.21397637290828486	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2122	0.19420781151042793	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1554	0.1422238167234708	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1435	0.13133280373113293	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1404	0.1284956490860701	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1398	0.12794652238057408	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1227	0.11229641127393736	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1157	0.10588993304315039	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1136	0.10396798957391427	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1475	53.21924	1
TCAACGC	2040	37.322388	4
ATCAACG	2045	37.231133	3
CAACGCA	2120	35.913994	5
AACGCAG	2230	34.142452	6
GTACATG	4665	32.84809	1
ACCTAAG	800	32.315945	1
TACATGG	4735	32.263206	2
GGTATCA	540	31.336676	1
ACATGGG	4915	30.694887	3
TAAGACA	1045	28.783808	4
TATCAAC	2685	28.185501	2
CTAAGAC	1005	27.591194	3
CCTAAGA	1035	26.340973	2
GGTACCT	645	26.231754	8
ATTATCC	955	26.08297	3
ACCAGAT	1110	25.828035	94
ACGCAGA	2995	25.42159	7
CATGGGG	3200	25.114855	4
GGGTACC	675	25.065899	7