SRR6575802_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575802_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1231845
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2028	0.16463110212729684	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1775	0.14409280388360549	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1633	0.13256537957291706	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1629	0.13224066339515117	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1464	0.11884612106230898	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1358	0.11024114235151337	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1345	0.1091858147737743	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1313	0.10658808535164732	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1300	0.10553275777390825	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1276	0.10358446070731302	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1259	0.10220441695180806	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1685	49.45816	1
ATCAACG	2155	37.945026	3
TCAACGC	2160	37.857185	4
CTTAGGT	510	37.780396	3
TTAGGTA	535	36.893375	4
GTCTTAG	685	36.429222	1
CAACGCA	2245	36.42384	5
GGTATCA	780	35.6141	1
AACGCAG	2330	35.092228	6
AGGTATA	565	34.09989	6
TAGGTAT	590	32.65763	5
GTACATG	4590	30.157772	1
GGTATAG	640	30.105032	7
TACATGG	4610	29.564297	2
GTATAGT	690	29.307045	8
ACCTAAG	755	28.686363	1
TCTTAGG	825	28.483053	2
ACATGGG	4745	28.32583	3
TATAGTA	720	28.085918	9
TATCAAC	2995	27.617626	2