SRR6575803_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575803_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	590521
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1303	0.22065261015272955	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	757	0.12819188479325883	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	752	0.12734517485406954	No Hit
CCTATAAGCAGTTCTTGTATTTTTATTCACACAGGTCTGATTAAGATGAA	752	0.12734517485406954	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	666	0.11278176390001372	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	654	0.1107496600459594	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	633	0.10719347830136439	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	604	0.10228256065406649	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1315	0.0	52.885952	1
CGCTAAA	45	0.0010150519	41.765247	5
ATCAACG	1785	0.0	38.16782	3
TCAACGC	1780	0.0	38.011066	4
CAACGCA	1820	0.0	37.691986	5
AACGCAG	1825	0.0	37.07381	6
ACATGGG	3265	0.0	33.67443	3
GTACATG	3310	0.0	33.64532	1
TACATGG	3325	0.0	33.493538	2
CGCAGAG	2160	0.0	31.323935	8
ACGCAGA	2165	0.0	31.251593	7
TATCAAC	2230	0.0	30.34324	2
CATGGGG	1685	0.0	28.163654	4
GCAGAGT	2485	0.0	27.416319	9
TGCGCGA	70	0.008841884	26.851358	94
CGATTGC	35	0.008847228	26.850224	78-79
GTAGTAC	70	0.008845537	26.849087	3
CATATAC	160	6.924165E-8	26.429571	3
GGTATCA	635	0.0	25.899933	1
CATGGGA	1185	0.0	25.772856	4