SRR6575825_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575825_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1192560
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2718	0.227913060978064	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2218	0.18598644931911182	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1929	0.16175286778023748	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1410	0.11823304487824512	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1351	0.11328570470248876	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1331	0.11160864023613067	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1315	0.11026698866304421	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1195	0.10020460186489569	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1835	56.60223	1
TCAACGC	2225	46.25073	4
ATCAACG	2260	45.9503	3
CAACGCA	2375	43.725338	5
AACGCAG	2435	42.64791	6
GGTATCA	585	39.365658	1
TATCAAC	2860	36.319508	2
ACGCAGA	3015	34.28782	7
CTTAGGT	560	33.56421	3
CGCAGAG	3175	32.707928	8
TAGGTAT	550	32.465748	5
GTACATG	4605	31.433908	1
TTAGGTA	590	31.061117	4
GTCTACG	305	30.818214	1
AGGTATA	580	30.786484	6
TACATGG	4730	30.506403	2
ACATGGG	4875	29.591585	3
TACGTGT	325	28.916859	4
GTCTTAG	685	28.816156	1
GCAGAGT	3670	28.293995	9