SRR6575826_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575826_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	198964
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	546	0.2744215033875475	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	379	0.19048672121589835	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	360	0.18093725498080054	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	341	0.17138778874570276	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	298	0.14977583884521825	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	294	0.14776542490098712	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	255	0.12816388894473374	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	254	0.12766128545867594	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	231	0.11610140527934702	No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG	231	0.11610140527934702	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	219	0.11007016344665367	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	212	0.10655193904424921	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	210	0.10554673207213365	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	205	0.10303371464184476	No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCG	204	0.10253111115578697	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGACAT	25	0.005235511	56.384167	5
GCTAACC	45	1.6117652E-5	52.20756	3
GTATAGT	50	3.0053743E-5	46.986805	8
GTCTTAG	70	8.579627E-8	46.986805	1
CTAATTC	40	5.673188E-4	46.986805	3
GTATCAA	645	0.0	45.894093	1
TATAGTA	55	5.2760304E-5	42.715275	9
TTAGGTA	45	0.0010133319	41.76605	4
GTACATG	1195	0.0	40.499084	1
TACATGG	1220	0.0	39.669186	2
GGGAATA	95	2.1071173E-8	39.567837	8
AACGCAG	755	0.0	39.207535	6
CTAACCT	60	8.812352E-5	39.155674	4
ACATGGG	1235	0.0	38.80692	3
AGGTATA	50	0.0017009912	37.589447	6
GGTATAG	50	0.0017009912	37.589447	7
GTACTAC	50	0.0017009912	37.589447	6
GGGTACC	240	0.0	37.19789	7
TAGGTAT	55	0.002715372	34.172222	5
AATACTG	55	0.002715372	34.172222	6