SRR6575828_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575828_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1426721
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2005	0.14053203113993556	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1783	0.12497187607107486	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1781	0.1248316944938779	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1709	0.11978515771478795	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1621	0.11361716831812245	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1591	0.11151444466016831	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1556	0.10906126705922181	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1530	0.10723890655566154	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1487	0.10422500264592727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2240	52.247623	1
GGTATCA	905	41.54862	1
TCAACGC	2810	40.80157	4
ATCAACG	2830	40.513226	3
CAACGCA	3010	38.246616	5
AACGCAG	3025	38.05696	6
GTACATG	5870	33.469822	1
TACATGG	6050	32.475163	2
ACATGGG	6260	30.925468	3
TATCAAC	3755	30.793251	2
ACGCAGA	3800	30.295343	7
CGCAGAG	4030	28.682928	8
ACCTAAG	710	27.141928	1
AGGTATA	475	26.709364	6
ATTATCC	950	26.214746	3
CATGGGG	3700	26.161276	4
CTAAGAC	1015	25.9248	3
GTCTTAG	825	25.637386	1
TAAGACA	1100	25.630198	4
GCAGAGT	4565	25.629301	9