SRR6575844_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575844_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1356617
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2906	0.21420931626243814	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2837	0.20912313497472018	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2225	0.16401091833583098	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1587	0.11698216961751179	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1554	0.1145496481320815	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1516	0.11174856278522237	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1462	0.10776807308179095	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1447	0.10666238149750445	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1441	0.10622010486378987	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1368	0.10083907248692887	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1365	0.10061793417007157	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2380	0.0	50.766552	1
GGTATCA	940	0.0	45.012814	1
TCAACGC	2865	0.0	41.66645	4
ATCAACG	2960	0.0	40.170406	3
CAACGCA	3025	0.0	39.9287	5
AACGCAG	3085	0.0	38.999783	6
TATCAAC	3760	0.0	32.134148	2
GTACATG	5455	0.0	31.801905	1
GGTAATC	355	0.0	31.773151	8
TACATGG	5540	0.0	31.313969	2
ACGCAGA	3855	0.0	31.209946	7
ACCTAAG	1075	0.0	30.176031	1
ACATGGG	5735	0.0	29.665562	3
CGCAGAG	4085	0.0	29.337666	8
GATACGT	65	0.006155969	28.921715	4
CTAAGAC	1275	0.0	28.38298	3
GCAGAGT	4420	0.0	27.220436	9
GGGTACC	830	0.0	27.179443	7
GGTACCT	840	0.0	26.855879	8
TAAGACA	1410	0.0	26.665413	4