SRR6575845_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575845_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1205942
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2714	0.22505228277976885	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2664	0.22090614639841719	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2198	0.18226415532421958	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1561	0.12944237782579926	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1441	0.11949165051055523	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1376	0.11410167321479806	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1358	0.11260906411751145	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1352	0.11211152775174925	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1324	0.1097896913781923	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1257	0.10423386862718108	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2060	0.0	52.716652	1
TCAACGC	2475	0.0	42.71636	4
ATCAACG	2520	0.0	41.953568	3
GGTATCA	755	0.0	41.718716	1
CAACGCA	2575	0.0	41.057472	5
AACGCAG	2715	0.0	39.459534	6
GGTAATC	315	0.0	32.81565	8
GTACATG	4865	0.0	32.66156	1
TACATGG	4925	0.0	32.262314	2
TTAGGTA	670	0.0	32.260418	4
TATCAAC	3300	0.0	31.909435	2
TAGGTAT	690	0.0	31.325329	5
ACGCAGA	3420	0.0	31.186647	7
GTCTTAG	820	0.0	30.95872	1
ACATGGG	5165	0.0	30.294292	3
CGATAGG	80	4.7742427E-4	29.382118	1
CGCAGAG	3640	0.0	29.30174	8
CTTAGGT	725	0.0	29.164965	3
AGGGTAA	345	0.0	28.601389	6
AGGTATA	760	0.0	28.440104	6