SRR6575849_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575849_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1516374
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5283	0.3483968994456513	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	5008	0.33026153178569406	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	4130	0.27236024885681237	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	2380	0.15695336374799357	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	2259	0.1489738019776124	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1998	0.1317616893985257	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGTTGCTGCTGTGTTTGGGACT	1787	0.11784691639397668	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1717	0.11323064098962393	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1653	0.10901004633421571	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	1583	0.10439377092986296	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2660	51.37211	1
TCAACGC	3090	43.198303	4
CAACGCA	3145	42.59089	5
ATCAACG	3135	42.581043	3
GGTATCA	955	41.446407	1
AACGCAG	3255	41.151566	6
GGTAATC	440	37.385902	8
TATCAAC	3850	34.551044	2
ACGCAGA	4085	32.790295	7
GTCTTAG	1515	31.413746	1
GTACATG	5960	31.150208	1
TTAGGTA	1410	31.000643	4
AGGTATA	1375	30.421444	6
TACATGG	6105	30.335144	2
TAGGTAT	1395	30.322208	5
ACCAGAT	1925	30.274956	94
CTTAGGT	1405	30.10937	3
CGCAGAG	4575	29.586521	8
ACCTAAG	2080	28.544224	1
ACATGGG	6505	28.397543	3