SRR6575850_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575850_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1372287
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4846	0.3531331273997349	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	4496	0.32762825852026584	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3978	0.28988105257865154	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	2194	0.15987909234730052	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	2144	0.1562355396502335	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1840	0.13408273925206607	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1751	0.1275972154512868	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1734	0.126358407534284	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGTTGCTGCTGTGTTTGGGACT	1716	0.12504672856333987	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	1548	0.11280439150119473	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	960	47.003864	1
GTATCAA	2435	46.714314	1
TCAACGC	2840	39.543095	4
ATCAACG	2885	38.926308	3
CAACGCA	2945	38.133244	5
AACGCAG	3065	36.640255	6
TAGGTAT	1255	33.322483	5
AGGTATA	1260	33.190254	6
TATCAAC	3450	33.108276	2
TTAGGTA	1260	32.81733	4
ACCAGAT	1645	32.563427	94
GTCTTAG	1405	31.781973	1
CTTAGGT	1305	31.6857	3
GGTATAG	1365	30.637157	7
GTACATG	5825	30.179304	1
TACATGG	5900	29.478073	2
TATAGTA	1455	29.063963	9
TCTTAGG	1505	29.046635	2
ACGCAGA	3955	28.632656	7
GTATAGT	1485	28.477846	8