SRR6575850_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575850_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1372287
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5123	0.37331840934148613	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	4804	0.3500725431341986	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3951	0.28791353412223536	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	2228	0.1623567081813061	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	2073	0.15106169482039836	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1814	0.13218809184959124	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1733	0.12628553648034266	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGTTGCTGCTGTGTTTGGGACT	1699	0.1238079206463371	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1609	0.11724952579161647	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	1477	0.10763054667135956	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1469	0.10704757823982886	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2420	0.0	49.018604	1
GGTATCA	965	0.0	45.366093	1
TCAACGC	2980	0.0	38.161938	4
ATCAACG	2985	0.0	38.09802	3
CAACGCA	3105	0.0	36.62563	5
AACGCAG	3230	0.0	35.35372	6
TCTTAGG	1375	0.0	32.467754	2
GTCTTAG	1315	0.0	32.21755	1
TATCAAC	3605	0.0	31.936857	2
CTTAGGT	1260	0.0	31.701492	3
AGGTATA	1315	0.0	31.090296	6
TAGGTAT	1300	0.0	31.087547	5
GTACATG	5815	0.0	30.923553	1
TTAGGTA	1285	0.0	30.71903	4
GGTAATC	340	0.0	30.428175	8
TACATGG	6075	0.0	29.704094	2
ACATGGG	6205	0.0	28.9303	3
CATATAC	325	0.0	28.918648	3
ATTATCC	2120	0.0	28.594677	3
CCCTATA	165	2.9704097E-9	28.480488	2