SRR6575852_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575852_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1424668
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2151	0.15098254470515238	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2061	0.14466528342041796	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1943	0.13638265195821062	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1881	0.13203076085094914	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1673	0.1174308681040074	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1538	0.10795497617690578	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1522	0.10683190750406411	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1460	0.10248001639680263	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1439	0.10100598876369793	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1432	0.1005146462193297	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2235	0.0	51.526733	1
GGTATCA	830	0.0	42.474396	1
TCAACGC	2840	0.0	38.714523	4
ATCAACG	2865	0.0	38.3767	3
CAACGCA	2925	0.0	37.589485	5
AACGCAG	3050	0.0	36.202988	6
GTCTTAG	820	0.0	33.82067	1
TAGGTAT	570	0.0	32.973232	5
CTTAGGT	625	0.0	32.326958	3
TATCAAC	3545	0.0	31.291372	2
TTAGGTA	610	0.0	30.040777	4
GTACATG	5640	0.0	29.753168	1
CCGCGTT	65	0.0061630714	28.91499	9
TACATGG	5840	0.0	28.491758	2
AGGTATA	645	0.0	28.410658	6
ACGCAGA	3880	0.0	28.337435	7
ACATGGG	5980	0.0	27.579243	3
CGCAGAG	4160	0.0	26.656006	8
TCTTAGG	990	0.0	26.112974	2
GGTATAG	740	0.0	24.763344	7