SRR6575858_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575858_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1561662
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2002	0.1281967544833645	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1942	0.12435469390943751	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1872	0.11987228990652267	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1833	0.11737495053347011	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1811	0.11596619498969687	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1810	0.11590216064679809	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1750	0.11206010007287108	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1730	0.11077941321489541	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1704	0.10911452029952705	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2110	53.241993	1
TCAACGC	2750	40.496307	4
ATCAACG	2790	39.915714	3
CAACGCA	2810	39.464394	5
AACGCAG	2925	37.912804	6
TTAGGTA	635	34.779545	4
AGGTATA	665	34.623756	6
TAGGTAT	680	33.859997	5
GGTATCA	940	33.503162	1
CTTAGGT	715	32.202515	3
GTCTTAG	840	30.776714	1
GTACATG	5755	30.138378	1
GGTATAG	750	30.073206	7
ACGCAGA	3750	29.571987	7
TACATGG	5820	29.399845	2
ACCTAAG	810	29.015085	1
TATAGTA	800	28.779156	9
TATCAAC	3940	28.63398	2
GTATAGT	815	28.251286	8
ACATGGG	6030	28.209217	3