SRR6575867_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575867_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1329353
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2374	0.1785831152447845	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1969	0.14811716677210643	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1616	0.12156289563419198	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1537	0.1156201550679165	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1533	0.11531925681139622	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1513	0.11381476552879484	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1478	0.1111819057842424	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1419	0.10674365650056833	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2075	52.42547	1
TCAACGC	2700	39.33484	4
ATCAACG	2725	38.97397	3
CAACGCA	2785	38.13431	5
AACGCAG	2880	36.87641	6
GGTATCA	880	35.319107	1
GTCTTAG	830	34.609886	1
TAGGTAT	555	33.02207	5
ACCTAAG	830	31.77301	1
TATCAAC	3560	30.360613	2
ACGCAGA	3565	29.922579	7
CTTAGGT	615	29.800406	3
TTAGGTA	585	29.722034	4
GTACATG	5040	29.339153	1
AGGTATA	610	29.274296	6
TACATGG	5210	28.592638	2
CTAAGAC	1215	28.234447	3
ACATGGG	5275	27.973055	3
TAAGACA	1280	27.167799	4
CGCAGAG	3965	27.040735	8