SRR6575872_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575872_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1155151
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1809	0.15660290299709734	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1778	0.1539192711602206	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1456	0.12604412756427513	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1392	0.12050372635265866	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1274	0.11028861161874075	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1261	0.10916321762263115	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1229	0.10639301701682291	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1194	0.10336311010422014	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1161	0.10050634072948038	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1925	52.558037	1
TCAACGC	2485	39.90116	4
ATCAACG	2500	39.47378	3
CAACGCA	2595	38.028694	5
AACGCAG	2695	36.791977	6
GGTATCA	755	36.15035	1
GTCTTAG	730	32.231358	1
GTACATG	4585	30.27709	1
TATCAAC	3305	30.144817	2
ACGCAGA	3290	30.138111	7
TAGGTAT	560	29.370375	5
CTTAGGT	625	29.323381	3
TACATGG	4630	29.232082	2
TTAGGTA	580	29.167818	4
AGGTATA	560	28.531221	6
ACATGGG	4875	27.858177	3
CGCAGAG	3580	27.715952	8
GGTATAG	590	27.08048	7
TCTTAGG	870	25.928074	2
GCAGAGT	3825	25.694796	9