SRR6575874_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575874_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1327906
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4288	0.3229144231594706	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3435	0.25867794858973453	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3149	0.23714027950773622	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1640	0.12350271781285724	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1632	0.12290026553084331	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	1563	0.11770411459847308	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1427	0.10746242580423615	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1394	0.10497731014092865	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1388	0.1045254709294182	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1361	0.10249219447762115	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1354	0.10196504873085895	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2625	0.0	49.144665	1
GGTATCA	1065	0.0	44.65055	1
TCAACGC	3105	0.0	40.55958	4
ATCAACG	3140	0.0	40.257137	3
CAACGCA	3170	0.0	39.876152	5
AACGCAG	3270	0.0	38.800404	6
TATCAAC	3900	0.0	32.5351	2
TTAACGC	60	0.0041648527	31.327734	3
GTACATG	6175	0.0	30.498472	1
TACATGG	6285	0.0	29.759853	2
AGGTATA	1020	0.0	29.48493	6
ACGCAGA	4305	0.0	29.473194	7
TAGGTAT	1015	0.0	29.1672	5
GTCTTAG	1115	0.0	29.135958	1
ACATGGG	6420	0.0	29.131865	3
CTTAGGT	1050	0.0	28.642502	3
TTAGGTA	1040	0.0	28.014223	4
CGCAGAG	4605	0.0	27.673923	8
ACCTAAG	1755	0.0	27.095634	1
GGTATAG	1135	0.0	26.912502	7