SRR6575891_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575891_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1551384
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3341	0.21535609494490082	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3163	0.20388246881494201	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2753	0.1774544535717785	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1986	0.12801472749493356	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1911	0.12318033446264755	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1803	0.11621880849615569	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1740	0.11215791834903543	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1659	0.10693677387416656	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1617	0.10422951377608639	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2530	43.550766	1
ATCAACG	2935	36.826927	3
TCAACGC	2950	36.639668	4
CAACGCA	3155	34.407917	5
TTAGGTA	880	33.64369	4
GTCTTAG	1040	33.05141	1
AACGCAG	3350	32.545345	6
GGTATCA	1190	32.446465	1
AGGTATA	965	31.167244	6
CTTAGGT	975	30.847576	3
TAGGTAT	980	30.690193	5
GTACATG	6075	29.841106	1
CTAAGAC	1430	28.919605	3
TACATGG	6260	28.677994	2
TATCAAC	3845	28.600868	2
ACCTAAG	1320	28.537539	1
TAAGACA	1555	28.408165	4
ACATGGG	6390	27.873024	3
GGTATAG	1070	27.668682	7
TCTTAGG	1255	27.336245	2